RARE DISEASERESEARCH ATLAS

ORPHA:79233

Hypoxanthine guanine phosphoribosyltransferase partial deficiency

low confidenceDisorder

Also known as: HPRT deficiency, grade I · HPRT partial deficiency · HPRT-related gout · HPRT-related hyperuricemia · HPRT1 partial deficiency · Hypoxanthine guanine phosphoribosyltransferase 1 partial deficiency · Hypoxanthine guanine phosphoribosyltransferase deficiency, grade I · Kelley-Seegmiller syndrome

Query health: suspect — Only one of 2 strategies returned hits (phrase).

Publications

15,341

Trials

0

Interventional, condition-specific

Researchers

405

Distinct authors in sample

Gene link

HPRT1

Strong

Readiness

3/6

Stages with a signal

Clinical definition (Orphanet)

A rare hypoxanthine-guanine phosphoribosyltransferase (HPRT) deficiency characterized by uric acid overproduction leading to urolithiasis, and early-onset gout, and a continuum spectrum of neurological manifestations, depending on the degree of the deficiency, without self-injurious behavior.

How rare: How common this is has not been clearly measured.

Orphanet entry

Cross-references

Joined from Mondo / Orphanet. MeSH labels may enter searches; UMLS / OMIM / NCIT are stored for reference.

Additional Mondo synonyms (3)

hyperuricemia, HRPT-related, X-linked recessive · hypoxanthine guanine phosphoribosyltransferase 1 partial deficiency · hypoxanthine guanine phosphoribosyltransferase deficiency, grade I

Research stages

Trial readiness signals

Where this condition sits on an open-data research pipeline — not how close a treatment is, and not medical advice. Empty stages often mean “not in these databases under this Mondo ID,” not “impossible.”

3/6 stages with a signal

No matched interventional trial; the gene is known and literature exists — preclinical or natural-history work may still be the practical next step.

  1. Gene identifiedPresent

    Strong — HPRT1

  2. LiteraturePresent

    15,341 matched papers (10,335 in last 10 years) Source

  3. Phenotype characterisedPresent

    23 HPO annotations (e.g. Self-mutilation; Renal insufficiency; Kidney stone) Source

  4. Animal modelNot found

    No Alliance genotype “model of” associations via Monarch for these Mondo IDs

  5. Orphan designationNot found

    No FDA or EMA orphan-drug designation matched this disease via UMLS or preferred name Source

  6. Interventional trialNot found

    No matched interventional trial under our ClinicalTrials.gov rules

Biology

Genes and phenotypes

Gene–disease validity from GenCC, plus phenotypes and animal models joined from Monarch Initiative via Mondo ID — not a clinical diagnosis aid.

Do we know what causes it?

Yes — we know a specific gene responsible (HPRT1).

GenCC classification: Strong.

Phenotypes (Monarch / HPO)

23

Associated phenotypes · MONDO:0010299

  • Self-mutilation
  • Renal insufficiency
  • Kidney stone
  • Podagra
  • Hyperuricosuria

Showing 5 of 23 — open Monarch for the full list.

Animal models (Monarch / Alliance)

None returned for this Mondo ID. Empty here is not proof that no model organism work exists under another name or gene.

Monarch fetch 2026-07-29

Therapies

Designations, candidates, and chemicals

FDA OOPD and EMA orphan designations, Open Targets clinical candidates, and CTD chemical associations via MyDisease.info. These never change the interventional-trial headline.

Orphan designation (FDA · EMA)

No designation matched this disease via UMLS or preferred name on the FDA OOPD mirror or EMA orphan register. Absence here is not proof that none exists under another wording.

Open Targets candidates

No drugs or clinical candidates returned for this Mondo ID on Open Targets.

CTD chemicals (MyDisease.info)

No CTD chemical associations returned for this Mondo ID.

Literature

Is anyone studying this?

15,341

15,341 papers — among the better-studied rare conditions, though still a fraction of common-disease literature (breast cancer: over 700,000). Median papers in the last 10 years for a rare disease in this dataset (publications denominator n=3967) is 59.

15,341 papers since the earliest indexed year in this search — median last-10-year count for a rare disease in this dataset is 59 (publications denominator n=3967).

10,335 in the last 10 years · low confidence

Phrase hits: 81 · MeSH hits: 0

Open Europe PMC search

Who's working on it?

405

Distinct author names in 81 sampled papers — named people below.

Who's working on it?

No interventional trial matched this name; these authors publish on it in the sampled literature — a practical starting point for contact.

  1. 01
    Yamada Y8 papers · 2014

    Department of Genetics, Inst. Developmental Res., Aichi Human Service Center, Aichi, Japan.

    Papers in Europe PMC
  2. 02
    Torres RJ6 papers · 2025

    Division of Clinical Biochemistry and Genetic Institute, Hospital Universitario La Paz, Universidad Autonoma de Madrid, Madrid, Spain.

    Papers in Europe PMC
  3. 03
    Wakamatsu N6 papers · 2014
    Papers in Europe PMC
  4. 04
    Fairbanks LD5 papers · 2017

    Purine Research Unit, Department of Chemical Pathology, GKT, Guy's Hospital, London SE1 9RT, U.K. lynette.fairbanks@kcl.ac.uk

    Papers in Europe PMC
  5. 05
    Puig JG5 papers · 2012

    'La Paz' University Hospital, Madrid, Spain.

    Papers in Europe PMC
  6. 06
    Yamada K5 papers · 2014
    Papers in Europe PMC
  7. 07
    Fujimori S4 papers · 2014
    Papers in Europe PMC
  8. 08
    Kaneko K4 papers · 2014
    Papers in Europe PMC
  9. 09
    Nomura N4 papers · 2014
    Papers in Europe PMC
  10. 10
    Jacomelli G3 papers · 2025

    Department of Biotechnology, Chemistry and Pharmacy, University of Siena, Siena, Italy.

    Papers in Europe PMC

Clinical research

Is a treatment being tested?

0

interventional trials for this specific condition

No interventional trial testing a treatment matched this specific condition name on ClinicalTrials.gov (observational studies and pan-disease registries are listed separately when present).

Data as of 11 September 2026 · last trial check 11 September 2026

No matched interventional trials. This is true for 77.2% of diseases in the trials denominator (5501 of 7126). Here are the researchers publishing on it.

low confidence · 38.6th percentile (trials denominator)

Recruiting interventional trials

From the matched ClinicalTrials.gov set

No interventional trial testing a treatment was found for this specific condition name on ClinicalTrials.gov.

See who's working on it — people publishing on this disease are often the practical next contact when no trial is listed.

Other registries (secondary)

Broader net from EU CTIS, ISRCTN, and ICTRP when available — deduped against ClinicalTrials.gov IDs already counted above. Dual-model LLM relevance gates what we keep. These rows are not added to the interventional headline.

raw 26 · after dedupe 25 · already on CT.gov 0 · kept 0 · parent 0 · uncertain 25 · dropped 0 · fetched 2026-07-30

Source notes: ictrp: Error: ICTRP public search unavailable (WHO portal is SPA-only; SOAP needs partnership). Tried: https://apps.who.int/tri

No secondary-registry studies passed dual-model relevance for this condition name (after dedupe).

Uncertain / not reviewed (25)

Where to find support

Condition-specific patient organisations, when Orphanet lists them, are on the disease’s Orphanet page. We also link umbrella groups that support undiagnosed and ultra-rare families.

Orphanet entry for Hypoxanthine guanine phosphoribosyltransferase partial deficiency — check Associations / patient organisations on that page.

India — NPRD

Last verified 2026-07-26

This ORPHAcode is not on our curated NPRD list (direct or Mondo-parent match). That does not decide clinical eligibility; families in India should ask a notified Centre of Excellence about current coverage.

Hand-curated for this project. ORPHAcode mappings are best-effort and may be incomplete or imprecise for umbrella categories. Parent (Mondo) matches mean the policy lists a broader category — confirm eligibility with a Centre of Excellence. Financial entitlements summarised from public policy statements and may change. This is not official government guidance.

How we counted this

Europe PMC query (preferred label + any corrected label + Orphanet and Mondo exact synonyms, stoplisted; unioned with resolved MeSH labels when available). UMLS / OMIM / NCIT cross-references are stored on the overview but are not added to the query string.

("Hypoxanthine guanine phosphoribosyltransferase partial deficiency" OR "HPRT deficiency, grade I" OR "HPRT partial deficiency" OR "HPRT-related gout" OR "HPRT-related hyperuricemia" OR "HPRT1 partial deficiency" OR "Hypoxanthine guanine phosphoribosyltransferase 1 partial deficiency" OR "Hypoxanthine guanine phosphoribosyltransferase deficiency, grade I" OR "Kelley-Seegmiller syndrome" OR "hyperuricemia, HRPT-related, X-linked recessive") OR (MESH:"Gout, HPRT-Related") OR ("HPRT1" OR "HPRT1 syndrome" OR "HPRT1-related")

Run this search on Europe PMC

MeSH descriptor terms unioned into the query: Gout, HPRT-Related

ClinicalTrials.gov query (quoted phrases + MeSH via query.cond, plus recall-expansion terms when used):

"Hypoxanthine guanine phosphoribosyltransferase partial deficiency" OR "HPRT deficiency, grade I" OR "HPRT partial deficiency" OR "HPRT-related gout" OR "HPRT-related hyperuricemia" OR "HPRT1 partial deficiency" OR "Hypoxanthine guanine phosphoribosyltransferase 1 partial deficiency" OR "Hypoxanthine guanine phosphoribosyltransferase deficiency, grade I" OR "Kelley-Seegmiller syndrome" OR "hyperuricemia, HRPT-related, X-linked recessive" OR "Gout, HPRT-Related"

Study-type breakdown: 0 interventional · 0 observational · 0 expanded access. Only interventional studies enter the trial headline.

Query health: suspect — strategies attempted: phrase, mesh; with hits: phrase

Run this search on ClinicalTrials.gov

Confidence reasoning

  • Preferred label is multi-word and distinctive
  • No synonyms dropped by stoplist
  • No label/synonym collisions with other diseases in this corpus
  • Publication count (15341) is extremely high with unknown/missing prevalence — treat as possible over-matching, not proven research intensity

Ingested 2026-07-27T02:05:51.405Z