RARE DISEASERESEARCH ATLAS

ORPHA:752

46,XY difference of sex development due to 17-beta-hydroxysteroid dehydrogenase 3 deficiency

high confidenceDisorder

Also known as: 17-beta-hydroxysteroid dehydrogenase 3 deficiency · 17-ketoreductase deficiency · 17-ketosteroidreductase deficiency · 46,XY disorder of sex development due to 17-beta-hydroxysteroid dehydrogenase 3 deficiency

Publications

1,589

88.1th percentile

Trials

0

Interventional, condition-specific

Researchers

262

Distinct authors in sample

Gene link

HSD17B3

Definitive

Readiness

4/6

Stages with a signal

Clinical definition (Orphanet)

A rare difference of sex development characterized by 17-beta hydroxysteroid dehydrogenase 3 deficiency that affects individuals with a 46,XY karyotype leading to underandrogenization of the genitalia.

How rare: 1-9 / 1 000 000 — roughly one to nine people per million. In a city the size of Kolkata, perhaps a few dozen.

Orphanet entry

Cross-references

Joined from Mondo / Orphanet. MeSH labels may enter searches; UMLS / OMIM / NCIT are stored for reference.

Additional Mondo synonyms (3)

17 Beta HSD3 deficiency · 17 beta HSD3 deficiency · Male pseudohermaphroditism due to 17-beta-hydroxysteroid dehydrogenase 3 deficiency

Research stages

Trial readiness signals

Where this condition sits on an open-data research pipeline — not how close a treatment is, and not medical advice. Empty stages often mean “not in these databases under this Mondo ID,” not “impossible.”

4/6 stages with a signal

No matched interventional trial, but a gene association and an animal model are on record — often described as translation-ready / stalled at the clinical step.

  1. Gene identifiedPresent

    Definitive — HSD17B3

  2. LiteraturePresent

    1,589 matched papers (1,186 in last 10 years) Source

  3. Phenotype characterisedPresent

    18 HPO annotations (e.g. Hypospadias; Clitoral hypertrophy; Inguinal hernia) Source

  4. Animal modelPresent

    1 genotype model (Mus musculus) Source

  5. Orphan designationNot found

    No FDA or EMA orphan-drug designation matched this disease via UMLS or preferred name Source

  6. Interventional trialNot found

    No matched interventional trial under our ClinicalTrials.gov rules

Biology

Genes and phenotypes

Gene–disease validity from GenCC, plus phenotypes and animal models joined from Monarch Initiative via Mondo ID — not a clinical diagnosis aid.

Do we know what causes it?

Yes — we know a specific gene responsible (HSD17B3).

GenCC classification: Definitive.

Phenotypes (Monarch / HPO)

18

Associated phenotypes · MONDO:0009916

  • Hypospadias
  • Clitoral hypertrophy
  • Inguinal hernia
  • Gynecomastia
  • Cryptorchidism

Showing 5 of 18 — open Monarch for the full list.

Animal models (Monarch / Alliance)

1

Model associations linked to this Mondo ID

Monarch fetch 2026-07-29

Therapies

Designations, candidates, and chemicals

FDA OOPD and EMA orphan designations, Open Targets clinical candidates, and CTD chemical associations via MyDisease.info. These never change the interventional-trial headline.

Orphan designation (FDA · EMA)

No designation matched this disease via UMLS or preferred name on the FDA OOPD mirror or EMA orphan register. Absence here is not proof that none exists under another wording.

Open Targets candidates

No drugs or clinical candidates returned for this Mondo ID on Open Targets.

CTD chemicals (MyDisease.info)

No CTD chemical associations returned for this Mondo ID.

Literature

Is anyone studying this?

1,589

1,589 papers have been published on this condition. That is a real research literature — still far smaller than common diseases (breast cancer: over 700,000 papers). Median papers in the last 10 years for a rare disease in this dataset (publications denominator n=3967) is 59.

1,589 papers since the earliest indexed year in this search — median last-10-year count for a rare disease in this dataset is 59 (publications denominator n=3967).

1,186 in the last 10 years · high confidence · 88.1th percentile (publications denominator)

Phrase hits: 31 · MeSH hits: 0

Open Europe PMC search

Who's working on it?

262

Distinct author names in 31 sampled papers — named people below.

Who's working on it?

No interventional trial matched this name; these authors publish on it in the sampled literature — a practical starting point for contact.

  1. 01
    Andersson S3 papers · 2001

    Department of Biochemistry, Merck Research Laboratories, Rahway, New Jersey 07065, USA.

    Papers in Europe PMC
  2. 02
    Hughes IA3 papers · 2004
    Papers in Europe PMC
  3. 03
    Wilson JD3 papers · 2001

    Department of Internal Medicine, University of Texas Southwestern Medical Center, 5323 Harry Hines Boulevard, Dallas, Texas 75390-8857, USA. jwils1@med.swmed.edu

    Papers in Europe PMC
  4. 04
    Ahmed SF2 papers · 2016

    Scottish Genital Anomaly Network, Scotland, UK. gcl328@clinmed.gla.ac.uk

    Papers in Europe PMC
  5. 05
    Bloise W2 papers · 2000
    Papers in Europe PMC
  6. 06
    Fisher AD2 papers · 2022

    Andrology, Women Endocrinology and Gender Incongruence, Careggi University Hospital, Florence, Italy.

    Papers in Europe PMC
  7. 07
    Haghighat D2 papers · 2025

    Department of Obstetrics and Gynecology, Boston University Chobanian & Avedisian School of Medicine, Boston, Massachusetts, USA.

    Papers in Europe PMC
  8. 08
    Horowitz K2 papers · 2025

    Department of Human Genetics, McGill University, Montreal, Québec, Canada.

    Papers in Europe PMC
  9. 09
    Huang H2 papers · 2023

    BGI Genomics, BGI-Shenzhen, 518083, Shenzhen, China.

    Papers in Europe PMC
  10. 10
    Joly Y2 papers · 2025

    Centre of Genomics and Policy, McGill University, Montreal, Québec, Canada.

    Papers in Europe PMC

Clinical research

Is a treatment being tested?

0

interventional trials for this specific condition

No interventional trial testing a treatment matched this specific condition name on ClinicalTrials.gov (observational studies and pan-disease registries are listed separately when present).

Data as of 11 September 2026 · last trial check 11 September 2026

No matched interventional trials. This is true for 77.2% of diseases in the trials denominator (5501 of 7126). Here are the researchers publishing on it.

high confidence · 38.6th percentile (trials denominator)

Recruiting interventional trials

From the matched ClinicalTrials.gov set

No interventional trial testing a treatment was found for this specific condition name on ClinicalTrials.gov.

See who's working on it — people publishing on this disease are often the practical next contact when no trial is listed.

Other registries (secondary)

Broader net from EU CTIS, ISRCTN, and ICTRP when available — deduped against ClinicalTrials.gov IDs already counted above. Dual-model LLM relevance gates what we keep. These rows are not added to the interventional headline.

raw 60 · after dedupe 60 · already on CT.gov 0 · kept 0 · parent 0 · uncertain 60 · dropped 0 · fetched 2026-07-29

Source notes: ictrp: Error: ICTRP public search unavailable (WHO portal is SPA-only; SOAP needs partnership). Tried: https://apps.who.int/tri

No secondary-registry studies passed dual-model relevance for this condition name (after dedupe).

Uncertain / not reviewed (60)

Where to find support

Condition-specific patient organisations, when Orphanet lists them, are on the disease’s Orphanet page. We also link umbrella groups that support undiagnosed and ultra-rare families.

Orphanet entry for 46,XY difference of sex development due to 17-beta-hydroxysteroid dehydrogenase 3 deficiency — check Associations / patient organisations on that page.

India — NPRD

Last verified 2026-07-26

This ORPHAcode is not on our curated NPRD list (direct or Mondo-parent match). That does not decide clinical eligibility; families in India should ask a notified Centre of Excellence about current coverage.

Hand-curated for this project. ORPHAcode mappings are best-effort and may be incomplete or imprecise for umbrella categories. Parent (Mondo) matches mean the policy lists a broader category — confirm eligibility with a Centre of Excellence. Financial entitlements summarised from public policy statements and may change. This is not official government guidance.

How we counted this

Europe PMC query (preferred label + any corrected label + Orphanet and Mondo exact synonyms, stoplisted; unioned with resolved MeSH labels when available). UMLS / OMIM / NCIT cross-references are stored on the overview but are not added to the query string.

("46,XY difference of sex development due to 17-beta-hydroxysteroid dehydrogenase 3 deficiency" OR "46,XY difference of the sex development due to 17-beta-hydroxysteroid dehydrogenase 3 deficiency" OR "17-beta-hydroxysteroid dehydrogenase 3 deficiency" OR "17-ketoreductase deficiency" OR "17-ketosteroidreductase deficiency" OR "46,XY disorder of sex development due to 17-beta-hydroxysteroid dehydrogenase 3 deficiency" OR "46,XY disorder of the sex development due to 17-beta-hydroxysteroid dehydrogenase 3 deficiency" OR "17 Beta HSD3 deficiency" OR "Male pseudohermaphroditism due to 17-beta-hydroxysteroid dehydrogenase 3 deficiency") OR ("HSD17B3" OR "HSD17B3 syndrome" OR "HSD17B3-related")

Run this search on Europe PMC

ClinicalTrials.gov query (quoted phrases + MeSH via query.cond, plus recall-expansion terms when used):

"46,XY difference of sex development due to 17-beta-hydroxysteroid dehydrogenase 3 deficiency" OR "46,XY difference of the sex development due to 17-beta-hydroxysteroid dehydrogenase 3 deficiency" OR "17-beta-hydroxysteroid dehydrogenase 3 deficiency" OR "17-ketoreductase deficiency" OR "17-ketosteroidreductase deficiency" OR "46,XY disorder of sex development due to 17-beta-hydroxysteroid dehydrogenase 3 deficiency" OR "46,XY disorder of the sex development due to 17-beta-hydroxysteroid dehydrogenase 3 deficiency" OR "17 Beta HSD3 deficiency" OR "Male pseudohermaphroditism due to 17-beta-hydroxysteroid dehydrogenase 3 deficiency"

Study-type breakdown: 0 interventional · 0 observational · 0 expanded access. Only interventional studies enter the trial headline.

Query health: ok — strategies attempted: phrase; with hits: phrase

Run this search on ClinicalTrials.gov

Confidence reasoning

  • Preferred label is multi-word and distinctive
  • No synonyms dropped by stoplist
  • No label/synonym collisions with other diseases in this corpus

Ingested 2026-07-26T15:12:34.862Z