RARE DISEASERESEARCH ATLAS

ORPHA:168558

46,XY difference of sex development-adrenal insufficiency due to CYP11A1 deficiency

low confidenceDisorder

Also known as: 46,XY disorder of sex development-adrenal insufficiency due to CYP11A1 deficiency · XY sex reversal-adrenal failure

Publications

8,272

Trials

1

Interventional, condition-specific

Researchers

511

Distinct authors in sample

Gene link

CYP11A1

Strong

Readiness

4/6

Stages with a signal

Clinical definition (Orphanet)

A rare, genetic, developmental defect during embryogenesis disorder characterized by severe, early-onset, salt-wasting adrenal insufficiency and ambiguous/female external genitalia (irrespective of chromosomal sex) due to mutations in the CYP11A1 gene. Milder cases may present delayed onset of adrenal gland dysfunction and genitalia may range from normal male to female in individuals with 46,XY karyotype. Imaging studies reveal hypoplastic/absent adrenal glands and biochemical findings include low serum cortisol, mineralocorticoids, androgens, and sodium, with elevated potassium levels.

How rare: <1 / 1 000 000 — fewer than one in a million. In a city the size of Kolkata, that might mean on the order of fifteen people.

Orphanet entry

Cross-references

Joined from Mondo / Orphanet. MeSH labels may enter searches; UMLS / OMIM / NCIT are stored for reference.

Additional Mondo synonyms (5)

XY sex reversal-adrenal failure syndrome · adrenal insufficiency, congenital, with 46,XY SEX reversal, partial or complete · adrenal insufficiency, congenital, with 46XY sex reversal, partial or complete · cholesterol side-chain cleavage deficiency · p450scc deficiency

Research stages

Trial readiness signals

Where this condition sits on an open-data research pipeline — not how close a treatment is, and not medical advice. Empty stages often mean “not in these databases under this Mondo ID,” not “impossible.”

4/6 stages with a signal

An interventional trial matched this condition name on ClinicalTrials.gov — see trials below.

  1. Gene identifiedPresent

    Strong — CYP11A1

  2. LiteraturePresent

    8,272 matched papers (5,779 in last 10 years) Source

  3. Phenotype characterisedPresent

    56 HPO annotations (e.g. Cryptorchidism; Male pseudohermaphroditism; Decreased fertility) Source

  4. Animal modelNot found

    No Alliance genotype “model of” associations via Monarch for these Mondo IDs

  5. Orphan designationNot found

    No FDA or EMA orphan-drug designation matched this disease via UMLS or preferred name Source

  6. Interventional trialPresent

    1 matched on ClinicalTrials.gov

Biology

Genes and phenotypes

Gene–disease validity from GenCC, plus phenotypes and animal models joined from Monarch Initiative via Mondo ID — not a clinical diagnosis aid.

Do we know what causes it?

Yes — we know a specific gene responsible (CYP11A1).

GenCC classification: Strong.

Phenotypes (Monarch / HPO)

56

Associated phenotypes · MONDO:0013400

  • Cryptorchidism
  • Male pseudohermaphroditism
  • Decreased fertility
  • Increased circulating renin concentration
  • Agenesis of corpus callosum

Showing 5 of 56 — open Monarch for the full list.

Animal models (Monarch / Alliance)

None returned for this Mondo ID. Empty here is not proof that no model organism work exists under another name or gene.

Monarch fetch 2026-07-29

Therapies

Designations, candidates, and chemicals

FDA OOPD and EMA orphan designations, Open Targets clinical candidates, and CTD chemical associations via MyDisease.info. These never change the interventional-trial headline.

Orphan designation (FDA · EMA)

No designation matched this disease via UMLS or preferred name on the FDA OOPD mirror or EMA orphan register. Absence here is not proof that none exists under another wording.

Open Targets candidates

No drugs or clinical candidates returned for this Mondo ID on Open Targets.

CTD chemicals (MyDisease.info)

No CTD chemical associations returned for this Mondo ID.

Literature

Is anyone studying this?

8,272

8,272 papers — among the better-studied rare conditions, though still a fraction of common-disease literature (breast cancer: over 700,000). Median papers in the last 10 years for a rare disease in this dataset (publications denominator n=3967) is 59.

8,272 papers since the earliest indexed year in this search — median last-10-year count for a rare disease in this dataset is 59 (publications denominator n=3967).

5,779 in the last 10 years · low confidence

Phrase hits: 81 · MeSH hits: 4

Open Europe PMC search

Who's working on it?

511

Distinct author names in 85 sampled papers — named people below.

Who's working on it?

People publishing on this condition (sampled Europe PMC records). Affiliation is the most recent found in that sample.

  1. 01
    Miller WL13 papers · 2025

    Department of Pediatrics, Center for Reproductive Sciences, and Institute for Human Genetics, University of California, San Francisco, CA, USA.

    Papers in Europe PMC
  2. 02
    Achermann JC9 papers · 2022

    Developmental Endocrinology Research Group, University College London Institute of Child Health, London, UK.

    Papers in Europe PMC
  3. 03
    Buonocore F5 papers · 2022

    Genetics and Genomic Medicine, UCL Great Ormond Street Institute of Child Health, London, UK.

    Papers in Europe PMC
  4. 04
    Tee MK4 papers · 2013

    Department of Pediatrics, University of California, San Francisco, San Francisco, California, 94143, USA.

    Papers in Europe PMC
  5. 05
    Ahmed SF3 papers · 2022

    Royal Hospital for Sick Children, University of Glasgow, GlasgowDevelopmental Endocrinology, UCL Institute of Child Health, University College London, LondonInstitute of Biomedical Research, University of Birmingham, BirminghamLeeds Centre for Reproductive Medicine, Leeds Teaching Hospitals, LeedsDepartment of Endocrinology, University College London Hospitals, LondonAlder Hey Children's NHS Foundation Trust, LiverpoolCLIMB CAH Support GroupDepartment of Paediatrics, University of Cambridge, CambridgeClinical Genetics Dept, Guys Hospital, LondonDept Clinical Biochemistry, Barts and the London NHS Trust, LondonDepartment Paediatric Urology, Alder Hey NHS Foundation Trust, LiverpoolAIS Support GroupDepartment of Biochemistry, Glasgow Royal Infirmary, Glasgow, UKSociety for Endocrinology, Bristol, UK.

    Papers in Europe PMC
  6. 06
    Hiort O3 papers · 2023

    Pediatric Endocrinology and DiabetologyChildren's Hospital, University of Luebeck, Luebeck, Germany.

    Papers in Europe PMC
  7. 07
    Krone N3 papers · 2017

    Division of Medical Sciences, University of Birmingham, Birmingham, UK.

    Papers in Europe PMC
  8. 08
    Merke DP3 papers · 2024

    National Institutes of Health Clinical Center, Bethesda, MD, United States.

    Papers in Europe PMC
  9. 09
    Sahakitrungruang T3 papers · 2015

    Department of Pediatrics, Faculty of Medicine, Chulalongkorn University, 10330 Bangkok, Thailand. [corrected].

    Papers in Europe PMC
  10. 10
    Arlt W2 papers · 2016

    Centre for Endocrinology, Diabetes and Metabolism, University of Birmingham Medical School, Birmingham, UK.

    Papers in Europe PMC

Clinical research

Is a treatment being tested?

1

interventional trials for this specific condition

1 interventional trial matched this specific condition name; none in our sample are currently recruiting.

Data as of 11 September 2026 · last trial check 28 July 2026

1 interventional trial — more than 77.2% of diseases in the trials denominator have none at all (5501 of 7126; this disease is at the 80.1th percentile).

low confidence · 80.1th percentile (trials denominator)

Recruiting interventional trials

From the matched ClinicalTrials.gov set

1 interventional trials matched after quoted-phrase search and title/condition post-filter.

No currently recruiting studies in the matched set. Open the same search on ClinicalTrials.gov.

Other registries (secondary)

Broader net from EU CTIS, ISRCTN, and ICTRP when available — deduped against ClinicalTrials.gov IDs already counted above. Dual-model LLM relevance gates what we keep. These rows are not added to the interventional headline.

raw 60 · after dedupe 60 · already on CT.gov 0 · kept 0 · parent 0 · uncertain 60 · dropped 0 · fetched 2026-07-30

Source notes: ictrp: Error: ICTRP public search unavailable (WHO portal is SPA-only; SOAP needs partnership). Tried: https://apps.who.int/tri

No secondary-registry studies passed dual-model relevance for this condition name (after dedupe).

Uncertain / not reviewed (60)

Where to find support

Condition-specific patient organisations, when Orphanet lists them, are on the disease’s Orphanet page. We also link umbrella groups that support undiagnosed and ultra-rare families.

Orphanet entry for 46,XY difference of sex development-adrenal insufficiency due to CYP11A1 deficiency — check Associations / patient organisations on that page.

India — NPRD

Last verified 2026-07-26

This ORPHAcode is not on our curated NPRD list (direct or Mondo-parent match). That does not decide clinical eligibility; families in India should ask a notified Centre of Excellence about current coverage.

Hand-curated for this project. ORPHAcode mappings are best-effort and may be incomplete or imprecise for umbrella categories. Parent (Mondo) matches mean the policy lists a broader category — confirm eligibility with a Centre of Excellence. Financial entitlements summarised from public policy statements and may change. This is not official government guidance.

How we counted this

Europe PMC query (preferred label + any corrected label + Orphanet and Mondo exact synonyms, stoplisted; unioned with resolved MeSH labels when available). UMLS / OMIM / NCIT cross-references are stored on the overview but are not added to the query string.

("46,XY difference of sex development-adrenal insufficiency due to CYP11A1 deficiency" OR "46,XY difference of the sex development-adrenal insufficiency due to CYP11A1 deficiency" OR "46,XY disorder of sex development-adrenal insufficiency due to CYP11A1 deficiency" OR "46,XY disorder of the sex development-adrenal insufficiency due to CYP11A1 deficiency" OR "XY sex reversal-adrenal failure" OR "XY sex reversal-adrenal failure syndrome" OR "adrenal insufficiency, congenital, with 46,XY SEX reversal, partial or complete" OR "adrenal insufficiency, congenital, with 46XY sex reversal, partial or complete" OR "cholesterol side-chain cleavage deficiency" OR "p450scc deficiency") OR (MESH:"Adrenal Insufficiency, Congenital") OR ("CYP11A1" OR "CYP11A1 syndrome" OR "CYP11A1-related")

Run this search on Europe PMC

MeSH descriptor terms unioned into the query: Adrenal Insufficiency, Congenital

ClinicalTrials.gov query (quoted phrases + MeSH via query.cond, plus recall-expansion terms when used):

"46,XY difference of sex development-adrenal insufficiency due to CYP11A1 deficiency" OR "46,XY difference of the sex development-adrenal insufficiency due to CYP11A1 deficiency" OR "46,XY disorder of sex development-adrenal insufficiency due to CYP11A1 deficiency" OR "46,XY disorder of the sex development-adrenal insufficiency due to CYP11A1 deficiency" OR "XY sex reversal-adrenal failure" OR "XY sex reversal-adrenal failure syndrome" OR "adrenal insufficiency, congenital, with 46,XY SEX reversal, partial or complete" OR "adrenal insufficiency, congenital, with 46XY sex reversal, partial or complete" OR "cholesterol side-chain cleavage deficiency" OR "p450scc deficiency" OR "Adrenal Insufficiency, Congenital"

Interventional trials matched via: mesh (mesh = registered under a MeSH descriptor no name phrase would catch; recall-expansion = gene / selected parent terms used only for trials).

Study-type breakdown: 1 interventional · 0 observational · 0 expanded access. Only interventional studies enter the trial headline.

Query health: ok — strategies attempted: phrase, mesh; with hits: phrase, mesh

Run this search on ClinicalTrials.gov

Confidence reasoning

  • Preferred label is multi-word and distinctive
  • No synonyms dropped by stoplist
  • No label/synonym collisions with other diseases in this corpus
  • Publication count (8272) is implausibly high for prevalence class "<1 / 1 000 000" — treat as possible over-matching, not a measure of research intensity

Ingested 2026-07-27T08:26:56.865Z